Dr. Jean Fan's banner
Dr. Jean Fan's profile picture

Dr. Jean Fan

@JEFworks • 8,806 subscribers

Associate prof comp biologist @JHUBME. Founder @cuSTEMized. Editor @PLOSCompBiol. Alum @HarvardDBMI @blairmagnet. Doing art like a science, science like an art.

Shorts

Just finished teaching another semester of genomic #datavisualization 🥳 Discover the awesome #dataviz made by students in the class for various #singlecell #spatialtranscriptomics data Check out the course notes + #Rstats code to explore for yourself:

Just finished teaching another semester of genomic #datavisualization 🥳 Discover the awesome #dataviz made by students in the class for various #singlecell #spatialtranscriptomics data Check out the course notes + #Rstats code to explore for yourself:

93,923 views

Videos

LIVE
1.2k

Anya Rossi

sweetdream.ai

SweetDream.aiSponsored•Livecam
Streaming Now

Watch Anya Live

Anya is streaming live right now! Join her private show and enjoy exclusive content.

HD live stream
Exclusive private shows
1.2k viewers online

Free preview available • Premium content

Thanks to the authors for sharing all components of this mouse embryo spatial transcriptomics data from cell gene counts to per-molecule coordinates: 🥳 So I vibe coded an app to explore the 3D subcellular transcript organization:
0:20
JEFworks's profile picture

Thanks to the authors for sharing all components of this mouse embryo spatial transcriptomics data from cell gene counts to per-molecule coordinates: 🥳 So I vibe coded an app to explore the 3D subcellular transcript organization:

Dr. Jean Fan

50,502 views • 4 months ago

Inspired by some gesture-based point cloud controllers I've seen on here, I vibe coded a similar web app to explore the relationship between spatial, UMAP, and PCA embeddings for spatial transcriptomics data. Next level interactivity via🖐️ Try it out:
0:42
JEFworks's profile picture

Inspired by some gesture-based point cloud controllers I've seen on here, I vibe coded a similar web app to explore the relationship between spatial, UMAP, and PCA embeddings for spatial transcriptomics data. Next level interactivity via🖐️ Try it out:

Dr. Jean Fan

17,620 views • 4 months ago

No more content to load