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Bacteria Flagellar Motor #learnontiktok #intelligentdesign #evolution #molecular #nanomachine #learning #funfacts #biotok #science #stem #3danimation #atp #biochemistry #coolscience #simulation #atpsynthase #ATP #blender3d A cut-open E. coli slice simulated based on real structures and biology, every molecule you see is a real one: its shape was worked out atom by atom...

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DNA relication machinery #learnontiktok #atpsynthase #flagellum #biotok #funfacts #biology #nanomachine #learning #molecularbiology #coolscience #scienceanimation #molecularmotor #biochemistry #stem Every time a bacterium divides, it must copy more than four million letters of DNA with astonishing accuracy. Behind this feat is a molecular assembly line called the replisome. At the front is the helicase, a ring-shaped motor made of six subunits. Fueled by ATP, it races along the DNA, pulling apart the double helix and exposing two single strands. But exposed DNA is unstable. Single-strand binding proteins quickly coat the strands, keeping them separated and protecting them until they can be copied. Now comes the copying machinery: two DNA polymerases, one for each strand. Each polymerase grips the DNA through a sliding clamp, a molecular ring that keeps it attached while it adds thousands of new DNA letters. But there's a problem. DNA polymerases can only build in one direction: from 5′ to 3′. At the replication fork, that creates two very different jobs. The leading strand runs in the right direction, allowing its polymerase to follow the helicase and copy DNA continuously. The lagging strand faces the opposite direction. It must be copied in short, separate pieces called Okazaki fragments. First, primase lays down a short RNA primer, creating a starting point for DNA synthesis. Then comes the clamp loader. Powered by ATP, it opens a sliding clamp, positions it around the primer, and snaps it shut, ready for the next round of copying. The lagging-strand polymerase then grabs the new clamp and starts building an Okazaki fragment. As synthesis continues, the DNA template loops out, forming a remarkable trombone-like structure. Once the polymerase reaches the previous fragment, it releases the DNA and jumps to a freshly loaded clamp to start again. Flexible tau proteins connect both polymerases and the helicase to the clamp loader, coordinating the entire machine into one synchronized molecular factory. Together, they can copy roughly a thousand DNA letters every second. And accuracy is just as remarkable as speed. A proofreading subunit catches many incorrectly paired letters and removes them before they become permanent mistakes. Finally, the RNA primers are removed and replaced with DNA, and DNA ligase seals the remaining gaps, joining all the fragments into one continuous strand. Two complete DNA molecules, copied from one, ready for the next generation.

iJEP Studio

91,400 Aufrufe • vor 7 Tagen

Evolution says you can turn anything into anything if you tweak it long enough. But that house of cards collapses immediately when you realize what it takes to make even a single cell. They say new cell types arise one mutation at a time. Is that plausible? Here is the issue: Different cell types are created through a massive coordinated stack of genetic information, and it's not all just about DNA sequences. First you need a whole suite of new genetic systems related to the cell: new genes for the cell’s internal systems, instructions for its specific functional role in the body, the regulators that coordinate everything, markers to tell them where to go and when, and the controls that keep the wrong programs off. But the DNA structure itself must also be manipulated. You see, every cell in your body contains the DNA instructions to make any other cell. So how does a bone cell become a bone cell instead of a skin cell? Because of how the DNA is folded. DNA is folded in certain ways for different cell types, so that only the "bone cell instructions" are able to be read by the "cell construction program." The DNA fold decides which programs are open for each cell type. This is critical. If DNA is not folded properly so that specific cell-type information can be read, catastrophe ensues. Then you need placement blueprints, so the cells form in the right place, in the right number, and lock together to form a functional tissue. These developmental instructions are passed from parent to offspring - but research shows that tweaking these master developmental programs ends badly for the child. One mutation at a time cannot invent that entire programming stack and keep it coordinated. Research has confirmed this. To convert one cell type into another in the lab, researchers have to force many changes to happen at the same time in coordination. And even when directed by the researcher, cell conversion almost always fails. Change the sequence without the fold and you cannot get a new cell type. Fold the DNA without the new systems and you can only rearrange old programs. Make the cell without the map and it shows up in the wrong place. Break one layer in the stack and the others do not patiently wait - they fail. So creating a new cell type is not simply "tweak a gene one at a time." It requires a coordinated stack of entirely new programmed instructions: > New suite of internal systems, programmed into the DNA > New functional DNA fold so only the right systems are activated > New mapping blueprints so everything goes where it's needed Step-by-step mutation does not coordinate those layers. It produces broken cells before it produces new ones. Coordination of this level of complexity has only ever been known to come from one place: Intelligence.

Divinely Designed

23,703 Aufrufe • vor 2 Monaten

This is how DNA turns coded information into functional proteins - the building blocks of the nanomachines that keep the cells in your body alive. This complex process highlights the sophisticated interconnected systems of Life which must all exist together from the beginning, or Life doesn't happen. First, an RNA molecule is copied from a short segment of DNA. Without the specifically ordered DNA information, RNA cannot form, proteins cannot be built, cells stop working, and life ceases to exist. Life is information first. Once the RNA Molecule is created, it gets ejected from the Polymerase where it was built, and it travels through a complex molecular machine called a Nuclear Pore Complex (NPC), which is an information recognition device that controls the flow of information in and out of a cell's nucleus. The NPC is highly complex - composed of about 500-1,000 protein subunits, derived from a set of about 35 distinct proteins. Without this molecular machine, there is no regulation for what goes in and out of the cell's nucleus, which would lead to catastrophic death for the cell. It must exist for cells to exist. Once the RNA Molecule passes through the NPC, it travels to the Ribosome, a 2-part chemical factory which reads the information on RNA and uses it to construct functional proteins using a specifically sequenced chain of amino acids. Once complete, this protein will then be sent to the section of the cell it belongs to integrate into another molecular machine and do its job. The Ribosome is another highly complex molecular machine - consisting of between 56-80 proteins. Without this molecular machines, proteins cannot be built. Proteins are the building blocks of every cell in every organism on Earth. Without Ribosomes, Life doesn't exist. If you're paying attention, you'll start to realize that Life relies on a highly sophisticated interdependent network of complex machines, which all rely on each other for the function of the system. DNA requires the cell for stability, but the cell requires the proteins for its structure and function, but those proteins require DNA and RNA to be built - it's a circle of necessary interdependence. Systems like this cannot be built by evolutionary processes, which requires that each piece of the process is built by gradual incremental means over lots of time. Without all the pieces there, from the beginning, none of it works. There is only one known source of complex & interdependent informational systems like those we find in life: and that is from Intelligence. Molecular Biology is the best and most obvious evidence of the Intelligent Design in Life.

Divinely Designed

62,743 Aufrufe • vor 10 Monaten

This is mind ATP Synthase The energy pump that powers every cell in every lifeform on Earth, slowed down by over 1,000x. Without ATP Synthase, life cannot exist. This little nano-machine is made up of a minimum of 8 distinct proteins, all designed perfectly to fit together and operate in a coordinated system that takes in ADP and turns it into ATP, which the cell uses to power metabolic processes. It's designed to only allow certain molecules in & out. Any mistakes, and it could flood the cell with toxic waste in a matter of seconds, killing everything. Each protein building block must fit perfectly together, much like all the pieces inside your phone. Without all the proteins fit & working together from the start, ATP Synthase cannot function, and Life cannot exist. But making things even more complex, ATP Synthase doesn't operate alone. It's located inside the cell membrane, where it actively works with other molecules to ensure the ATP it creates gets to the right place. It's a whole integrated network of energy movement within each cell, without which, Life could not exist. All these pieces must exist together, from the beginning, for Life to be possible. Which means it can't arise piece by piece through evolution - because the very process of evolution requires the whole system. Life requires this system in order to produce the energy it needs to replicate & evolve - but replication & evolution is supposed to have created it. You can't have one without the other. There are no simpler versions - it's literally all or nothing. This is clear evidence of an intelligently designed system. What more evidence do you need?

Divinely Designed

28,434 Aufrufe • vor 6 Monaten

166,000 neurons from a dead fruit fly now pilot a robot that drives and flies. It's the wildest piece of engineering on the internet right now, and the pilot has been dead the whole time. The robot rolls across a bedroom floor like a toy until the wheels stop being wheels: 4 propellers inside the rims spin up, and it lifts off, hangs at desk height, turns and lands. The body came out of a cardboard box of drone parts, and the brain it copies is smaller than a poppy seed and was never designed by a human. Janelia and Google spent years turning 1 male fruit fly into a spreadsheet, with every neuron and up to 125M synapses labeled, and on September 3 they posted it free for anyone to download. To build it, the fly was cut into thousands of layers and traced cell by cell under an electron microscope. Camera frames get turned into what a fly's eyes would see. The spikes run through the real wiring, where each neuron is 1 equation that rests at -52 mV and fires at -45. When something rushes at the lens, LPLC2 and LC4 light up, the same cells a fly uses to dodge your swatter, while DNg02 at the far end sets climb and turn. Inside the brain there's no flight code, no PID loop and no line that says "avoid the bed." Tesla's self-driving learned from billions of miles of driving, and this pilot learned from 400 million years of flies that didn't get swatted. A real fly walks on 6 legs and flies on 2 wings, and this one got 4 wheels and 4 propellers. The fly is dead, the brain is a file, and the file just took off.

Spike 1%

57,304 Aufrufe • vor 1 Monat

This video is one of the first times I thought biology was “cool.” It shows a neutrophil cell chasing a bacterium. Originally recorded in the 1950s by David Rogers at Vanderbilt University, the video gave me a deeper appreciation for life, even at the level of a single cell, because the neutrophil's movements seem so intentful, purposeful, aware. It wasn’t until recently, though, that I actually tried to demystify the neutrophil’s movements and understand how they happen. Here's what I learned: 1. The neutrophil's surface has thousands of protein receptors. Molecules secreted by the bacteria collide with these receptors. When that happens, the proteins change shape, slightly, and initiate a signaling cascade. 2. The neutrophil “knows” where to go because of a discrepancy in bound vs. unbound receptors. The side of the cell closest to the microbe will, probabilistically, have more "bound" receptors than the other side (because the molecules secreted by the microbe have a concentration gradient). This is how the neutrophil figures out which way to move. 3. Each bound receptor activates several G proteins located inside the cell membrane. Each G protein, in turn, switches on PI3K enzymes. In this way, the original signal is amplified; a single "activated" receptor might cause ~100 copies of PI3K to get switched on downstream. 4. The PI3K enzymes stick phosphates onto lipids in the cell membrane. The side of the neutrophil facing the bacterium now has more phosphates than the "back" side. Phosphate-binding proteins, such as GEF, accumulate and then recruit Rac, thus activating it. Rac, in turn, acts like a molecular switch, ultimately recruiting Arp2/3. (TL;DR: A bunch of proteins get activated, and the high phosphate concentration at the leading edge is the key signal for all this.) 5. At any given moment, the neutrophil has millions of actin molecules. These are the proteins used to build the cytoskeleton. Half of the actins are already “assembled” into filaments, but the other half are just floating around. Arp2/3 acts as a nucleator, grabbing onto actin and then starting a new cytoskeletal branch. More actin is assembled at the leading edge (where the Arp2/3 has accumulated), where they each push on the cell membrane with ~2 piconewtons of force. Hundreds of actin chains, pushing together, causes the cell to form protrusions. 6. The assembling actin chains push the cell at a speed of ~20 micrometers per minute (the length of about ten E. coli cells placed end-to-end.) As all of this is happening, another signaling cascade, nucleated at the back end of the cell, is dismantling actin filaments and recycling them. All this happens over a span of about 30 seconds. Much of this process is invisible; what we see, instead, is "just" a cell chasing its prey. But that's the wonderful thing about biology: A singular observation is usually more than enough fodder for a lifetime of work. The well is deep. There is always more to learn.

Niko McCarty.

127,486 Aufrufe • vor 10 Monaten

One of the largest trading firms in the world teaches new hires poker before it lets them near a book. A newspaper brought a camera to the table and sat down to play. The men across the felt are working Wall Street traders. The firm is Susquehanna, which built poker into its training programme decades ago and still runs it that way, on the argument that the card room teaches something no finance degree does. Gunjan Banerji from the Wall Street Journal plays the hands herself rather than interviewing them about it. A green table, a dealer, chips, 4 people who do this for a living. No lecture hall, no slides. The teaching happens between deals, while money is actually at stake. They break it into parts on camera. Risk management first. Then bet sizing. Then patience, which sounds like the soft one and is not. Then reading the person opposite when the only data available is how they behave with money on the table. The section on patience is the one most people skip. Folding is the correct action in the overwhelming majority of hands, and almost nobody can do it for hours without inventing a reason to play. The same failure shows up in a trading account as overtrading, and it kills more people than bad analysis. Then bet sizing, which is where the video earns the watch. Being right about the odds is the easy half. How much you put behind a correct read is the part that ends careers, and they work through it hand by hand instead of describing it in the abstract. The turn is what the traders admit about being wrong. A good decision loses regularly, a bad decision wins regularly, and the only way to last is to grade the process instead of the result. Everything else in the video sits downstream of that. It matters more now than when the firm started running these tables. Every model prices probability in a second and hands it to you for free. Nothing on the screen tells you how much of your account to put behind the number, or what to do after the number was right and you lost anyway. Free on YouTube, produced by a newspaper, filmed at a real table with real hands. The maths is public. The sizing is the job. 1 table. 4 traders. It is in the video.

kompot

63,388 Aufrufe • vor 3 Monaten