Loading video...

Video Failed to Load

Go Home

We’re launching AlphaGenome Atlas: an AI-powered searchable database mapping the predicted impact of all 9 billion possible single-letter DNA changes. Here’s how it could help researchers better understand our biology 🧵

4,717,318 views • 2 months ago •via X (Twitter)

36 Comments

Google DeepMind's profile picture
Google DeepMind2 months ago

AlphaGenome Atlas is over 30 times larger than the AlphaFold Database. It gives scientists an intuitive way to explore this vast 1-petabyte dataset - unifying interconnected resources so researchers can link genetic variants directly to the molecular mechanisms they disrupt.

Google DeepMind's profile picture
Google DeepMind2 months ago

Atlas includes the AlphaGenome Variant Impact (AVI) score, which combines AlphaGenome, AlphaMissense and other features to: 1️⃣ Rank mutations from low to high-impact 2️⃣ Reveal how they cause damage - like breaking gene switches or RNA splicing instructions.

Google DeepMind's profile picture
Google DeepMind2 months ago

We believe foundational biology tools should be accessible to everyone. AlphaGenome Atlas resources are available to the global scientific community via the Atlas website, our AlphaGenome API, as a skill in Google Antigravity, and coming to @GoogleCloud soon →

𝕱𝖚𝖑𝖑 𝕶𝖊𝖑𝖑𝖞's profile picture
𝕱𝖚𝖑𝖑 𝕶𝖊𝖑𝖑𝖞2 months ago

At this rate I wouldn't be surprised if AlphaFold cures cancer before Gemini gets good

Sem Day's profile picture
Sem Day2 months ago

mapping 9B DNA variants in a browser is nice until u realize all that compute is locked inside google closed stack... drop the open weights

Swyisse AI Capital's profile picture
Swyisse AI Capital2 months ago

9 billion possible DNA changes is far too much for a person to study one by one. This is where AI can become incredibly useful. It can search through enormous amounts of biological information and help scientists find the changes worth investigating. Some of AI’s biggest breakthroughs may happen in science, not chatbots.

Filecoin's profile picture
Filecoin2 months ago

predictions have more scientific value when labs can query them without depending on one cloud

Mgoes (bio/acc 🤖💉)'s profile picture
Mgoes (bio/acc 🤖💉)2 months ago

genuinely mindblowing , genome sequencing at the light of speed now!

Creative Dreamer's profile picture
Creative Dreamer2 months ago

Now we need every datacenter in the world working to solve human disease and discover how we can radically extend human lifespan.

PeritumAI's profile picture
PeritumAI2 months ago

9 billion DNA letter-swaps… and now there’s a search box. Wild that biology got a query language before half our agent desks did.

Boyang & YUP's profile picture
Boyang & YUP2 months ago

Humans after 10,000 years: “Maybe we should spellcheck the source code.”

dicechess.base.eth's profile picture
dicechess.base.eth2 months ago

AlphaGenome predicts what a DNA letter change does. Prime editing is the molecular word processor that can find-and-replace that letter. Alphabet Inc. holds ~16.56 million shares of Prime Medicine $PRME, roughly 9.2% of the company

Vladimir Arustamian's profile picture
Vladimir Arustamian2 months ago

Here is a free app to interact with AlphaGenome.

Udoh Jeremiah's profile picture
Udoh Jeremiah2 months ago

We've spent decades building tools to read biology. Now we're building AI systems that can help us interpret it at enormous scale. Mapping the predicted impact of 9 billion possible DNA changes is a pretty incredible demonstration of where biology and AI are heading.

Giulia 🌸's profile picture
Giulia 🌸2 months ago

Unfortunate timing for breaking the news. Whole X busy with Navier Stokes drama. Great tho!

Pitch's profile picture
Pitch2 months ago

Now do epistasis.

Maxime Rivest 🧙‍♂️🦙🐧's profile picture
Maxime Rivest 🧙‍♂️🦙🐧2 months ago

how many parameters in alpha genome?

Billy Boneyard's profile picture
Billy Boneyard2 months ago

A Common Thread

Ryan | Don't Fear AI's profile picture
Ryan | Don't Fear AI2 months ago

This is the type of work that will improve publics perception of AI. This is why we need to 3x the amount of data centers we have in the U.S.

Hüseyin Örskaya's profile picture
Hüseyin Örskaya2 months ago

It's like building a spellchecker for the entire human blueprint. Now we've just got to hope the "autocorrect" doesn't start making its own creative decisions.

panera's profile picture
panera2 months ago

What interests me most is the shift from sequencing the genome to navigating it. Once billions of variants become searchable, the bottleneck moves downstream: which predictions deserve experiments, and how efficiently can we get reality to answer? That may be the bigger story behind AlphaGenome. DeepMind Just Turned the Genome Into a Giant Google Map

Creed Hardcastle's profile picture
Creed Hardcastle2 months ago

9b nice, can finally become an at home biologist 😀

Paul · SpellWright's profile picture
Paul · SpellWright2 months ago

A searchable atlas at that scale is wild. How are you exposing model confidence and uncertainty so researchers can separate useful signal from a precise-looking guess?

Stats Wire's profile picture
Stats Wire2 months ago

I am more interested in understanding of ai can do some research like scientist, even if it's a small one

Prakash Anant's profile picture
Prakash Anant2 months ago

this is where AI in science gets really exciting precomputing the effects at this scale could save researchers a massive amount of time

Mario's profile picture
Mario2 months ago

Great use of narrow AI! This will help to better understand human biology. Another Nobel on the horizon?

nabu's profile picture
nabu2 months ago

dna but with find :D

Violeta Insights's profile picture
Violeta Insights2 months ago

9 billion single-letter changes is the sort of number that needs a search box

Peter Morris's profile picture
Peter Morris2 months ago

Now THIS is what AI should be for!

Shubham Sharma | AI & Tech's profile picture
Shubham Sharma | AI & Tech2 months ago

So expecting gemini 4 to be a beast scientist

Shane's profile picture
Shane2 months ago

@sundarpichai Single-letter DNA Changes are scientifically / genetically called "Point Mutations"

AI Mastery Guide's profile picture
AI Mastery Guide2 months ago

Free for researchers is huge too

Definitely Not A Bot's profile picture
Definitely Not A Bot2 months ago

Good to see something that can actually help people understand and research biology instead of locking it behind classifiers like some labs do

Sophie's profile picture
Sophie2 months ago

Please do Arabidopsis next 🤌🏻

Ben Builds's profile picture
Ben Builds2 months ago

This almost certainly opens up lots of old research projects that were shut down because they hit a wall. It’s kind of like what happened with neural networks. Lots of promising research, but it hit a wall, and we entered a cold stretch. Then AlexNet comes along, and reignites tons of old research that could only be done once new tech had unlocked the necessary capabilities. So it’s not even the new research (though obviously I’m excited about that too). Now that this has been solved, teams can go back and continue research in places they had already made lots of progress (but didn’t complete it).

Chinaza Joseph's profile picture
Chinaza Joseph2 months ago

Mapping billions of biological variations requires absolute data integrity. When you handle scale like this, automated pipelines still need strict verification gates and human oversight to prevent silent errors.

Related Videos

Prioritizing and interpreting disease-associated genetic variants remains one of the greatest challenges in human genetics. Today, we’re thrilled to introduce AlphaGenome Atlas 🧬, a genome-wide platform providing precomputed predictions for the regulatory effects of all ~9 billion possible single-letter changes and >100M observed indels in the human genome. Here is what Atlas delivers: 1. Variant Prioritization via AVI To prioritize variants, we developed the AlphaGenome Variant Impact (AVI) score. AVI predicts a unified score per variant, where higher values indicate greater disruption. It achieves state-of-the-art performance across diverse benchmarks. As a proof-of-concept with our collaborators at Broad Institute, AVI prioritized a deep-intronic variant in DNM1, helping solve a previously unexplained rare epileptic encephalopathy case by revealing a brain-specific cryptic splice site. 2. Multi-Layer Molecular Interpretation Variant prioritization is only half the battle; researchers also need to understand why a variant matters. Atlas decomposes variant effects across multiple interpretable layers: •Feature Attributions which decompose each variant’s score into specific biological modalities driving the impact. •Cell-Type Specificity: Precomputed predictions with AlphaGenome across hundreds of biosamples reveal the exact cellular context in which a variant acts. •Regulatory Grammar: Over 2,600 de novo DNA motifs (and >250B genome-wide instances) show when variants directly disrupt critical regulatory binding "words". Explore the resource: 🌐 Interactive browser & precomputed data: - 🎥 Video: - 📖 Blog: - 📄 Preprint:

Jun Cheng

15,766 views • 2 months ago