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I'm prototyping a little tool for interactively visualizing the near-nearest neighbor network in single-cell RNA-seq. Clicking a cell triggers a wave, revealing its nearest neighbors, then their neighbors, and so forth. Data: 10k PBMCs from a Healthy Donor (v3), 10x Genomics

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Brad Krajina

1,784 subscribers

36,019 Aufrufe • vor 1 Jahr •via X (Twitter)

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11 Kommentare

Profilbild von Brad Krajina
Brad Krajinavor 1 Jahr

This visualization was made in TypeScript with PixiJS and captured in real-time in a browser.

Profilbild von PDF GPT
PDF GPTvor 1 Jahr

This is my favorite AI tool for reviewing reports. Just upload a report, ask for a summary, and get one in seconds. It's like ChatGPT, but built for documents. Try it for free.

Profilbild von Thomas Czerniawski
Thomas Czerniawskivor 1 Jahr

So exciting to see new ways to poke and prod at higher dimensions

Profilbild von Brad Krajina
Brad Krajinavor 1 Jahr

Thanks Thomas! With the scale and dimensionality of the data we're dealing with today, I think there is so much room for re-thinking the way that we interface it.

Profilbild von Garry P. Nolan
Garry P. Nolanvor 1 Jahr

Fantastic!

Profilbild von ⌬Michel Rickhaus
⌬Michel Rickhausvor 1 Jahr

Gorgeous!

Profilbild von Brad Krajina
Brad Krajinavor 1 Jahr

Thank you!

Profilbild von Jeffrey West
Jeffrey Westvor 1 Jahr

this is cool!

Profilbild von Brad Krajina
Brad Krajinavor 1 Jahr

Thanks Jeffrey!

Profilbild von Curtis
Curtisvor 1 Jahr

This is really cool!!

Profilbild von Brad Krajina
Brad Krajinavor 1 Jahr

Thanks Curtis!

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